Plot class occupancy distributions — plotOccupancy • metabolyseR

Plot class occupancy distributions.

Usage

plotOccupancy(x, cls = "class", ...)

# S4 method for AnalysisData
plotOccupancy(x, cls = "class")

# S4 method for Analysis
plotOccupancy(x, cls = "class", type = "raw")

Arguments

x: S4 object of class AnalysisData or Analysis
cls: sample information column to use for class labels
...: arguments to pass to the appropriate method
type: raw or preTreated data to plot

Examples

library(metaboData)

d <- analysisData(abr1$neg,abr1$fact)

## Plot class occupancy distributions
plotOccupancy(d,cls = 'day')