Spectral processing — tar_spectral_processing • hrmtargets

Targets for spectral processing.

Usage

tar_spectral_processing(
  name,
  type = c("FIE-HRMS", "RP-LC-HRMS", "NP-LC-HRMS"),
  ...
)

Arguments

name: Symbol. The name for the collection of targets. This serves as a prefix for target names.
type: The type of analytical technique.
...: Arguments to pass to the relevant target factory. See details.

Value

A list of target objects for spectral processing for the specified technique.

Details

Technique FIE-HRMS will return targets using tar_spectral_binning(). Techniques RP-LC-HRMS and NP-LC-HRMS will return targets using tar_profiling().

Examples

if (FALSE) {
## Perform spectral processing using technique `FIE-HRMS` 
targets::tar_dir({
    targets::tar_script({
        library(hrmtargets)
        name <- rlang::expr(example)
        
        list(
            tar_input_piggyback(!!name,
                                'FIE-HRMS_BdistachyonTechnical',
                                repo = 'jasenfinch/metaboData'),
            tar_spectral_processing(!!name,
                                    type = 'FIE-HRMS')
        )
    })
    targets::tar_make()
    targets::tar_read(example_results_spectral_processing)
    targets::tar_read(example_plot_fingerprint)
})
}