Workflow input using a grover API — inputGrover • metaboWorkflows

Use .mzML files retrieved from a grover API for workflow input.

Usage

inputGrover(instrument, directory, host, port, auth)

Arguments

instrument: analytical instrument name
directory: experiment directory name
host: grover API host address
port: grover API host port
auth: grover API host authentication code

Value

An S4 object of class GroverInput

Details

This specifies the retrieval of sample data files and information using a grover API. See grover for more information about mass spectral data retrieval from a grover API.

Examples

workflow_input <- inputGrover(instrument = 'An_instrument',
                              directory = 'Experiment_directory',
                              host = 'a.grover.host',
                              port = 80,
                              auth = '1234')

workflow_input
#> Grover API workflow input 
#> Instrument: An_instrument 
#> Directory: Experiment_directory 
#> Host: a.grover.host 
#> Port: 80 
#> Authentication: 1234